Mud-gas isotope logging (MGIL) of hydrocarbons (methane, ethane, propane) has become a widely used approach to fingerprint gas-bearing formations during the drilling of vertical and horizontal oil and gas wells often with the goal to assess potential cross-formational gas migration. In this study, we have used mud-gas molecular and isotope data to assess the usefulness of MGIL for the geochemical assessment of a single low-permeability reservoir formation, the Montney Formation in Western Canada. An example from a well completed in British Columbia shows that hydrocarbon samples collected in IsoJars® tend towards more positive carbon isotope ratios compared to data for samples obtained using IsoTubes®, potentially attributed to 13C enriched residual gas retained in the cuttings. Additionally, in publically available mud-gas data from 45 other wells, it was found that the carbon isotope ratios of mud-gas from the Montney Formation are overall consistent with the thermal maturity of this stratigraphic unit, but the data display a relatively scattered trend on a thermal maturity plot based on Δ13CC1-C2 and Δ13CC1-C3. Molecular parameters such as [C1/(C2 + C3)] can be modified via processes such as desorption and diffusion after sampling gases in IsoJars®, while the i-C4/n-C4 ratio was found to be the most consistent molecular parameter between sampling techniques. We conclude that mud-gas molecular and isotope data derived from samples collected in IsoTubes® are suitable for geochemical assessment (e.g. thermal maturity, fluid–fluid correlations) of low permeability hydrocarbon reservoirs such as the Montney Formation.